Schwartz Lab https://validator.w3.org/feed/docs/rss2.html Richard Dong Sabrina Xi Chloe Nichole Calica Viet Hoang Bruno Saleme Gregory is a co-author on “Enhancer-promoter hubs organize transcriptional networks promoting oncogenesis and drug resistance” in collaboration with the Faryabi lab! Lin, Ho Seok, and Gregory are co-authors on “An inflammatory state defines a high-risk T-lineage acute lymphoblastic leukemia subgroup” in collaboration with the Tikhonova lab! An inflammatory state defines a high-risk T-lineage acute lymphoblastic leukemia subgroup Enhancer-promoter hubs organize transcriptional networks promoting oncogenesis and drug resistance Team Joshua Li News Publications Conor, Christie, and Javier’s article “TooManyCellsInteractive: A visualization tool for dynamic exploration of single-cell data” is now published in GigaScience! TooManyCellsInteractive: A visualization tool for dynamic exploration of single-cell data Attribution Fatema, Josh, and Deisha’s preprint “NEST: Spatially-mapped cell-cell communication patterns using a deep learning-based attention mechanism” is out now on bioRxiv! Richard, Almas, and Victoria receive Ontario Graduate Scholarships, congrats! Richard (Ph.D. student) and Victoria (Masters student) join the lab. Welcome! Tingxiao (Victoria) Gao Almas Khan Fatema Zohora Lin Yang Gregory Schwartz Leo Cui Deisha Paliwal Wendy Chen Christie Lau Deisha joins the lab as a Master’s student. Welcome! Deisha receives the Canada Graduate Scholarships – Master’s program! Way to go! In collaboration with the Faryabi lab, our new paper “AnnoSpat annotates cell types and quantifies cellular arrangements from spatial proteomics” is out on Nature Communications! Gregory presents at the Biophysics Seminar Series at the University of Toronto AnnoSpat annotates cell types and quantifies cellular arrangements from spatial proteomics NEST: Spatially-mapped cell-cell communication patterns using a deep learning-based attention mechanism TooManyCells identifies and visualizes relationships of single-cell clades. TooManyCellsInteractive: a visualization tool for dynamic exploration of single-cell data Javier Ruiz-Ramírez Single-cell multi-omics analysis of human pancreatic islets reveals novel cellular states in type 1 diabetes. Deisha presents at the MBP Summer Student Poster day and wins best poster. Congrats! Fatema, Christie, Lin, and Almas present at the CBMP retreat and Fatema wins best poster presentation! Christie is awarded the Data Sciences Institute Doctoral Student Fellowship, way to go! Gregory is featured on Meet PM Research! AnnoSpat annotates cell types and quantifies cellular arrangements from spatial proteomics NEST-Interactive NEST TooManyCellsInteractive Ho Seok Lee Conor and Christie’s article “TooManyCellsInteractive: a visualization tool for dynamic exploration of single-cell data” is on bioRxiv! Javier Ruiz Ramirez joins the lab as a postdoctoral researcher, welcome! SCHWARTZ LAB